All functions
analyseDeg	Analyse degree or centrality
analyseHubs	Return hubs or central species
analyseKlemm	Analyse Klemm matrices
analyseOutput	Compute network statistics
callTools	Call tools to infer networks
computeAdjacency	Compute adjacency
computeAUC	Compute AUC
computeCentral	Compute centrality
computeHub	Compute hubs
computePrecision	Compute precision
computeSensitivity	Compute sensitivity
computeSpecificity	Compute specificity
computeStat	Compute assortativity, transitivity or degree
envGrowthChanges	Generate growth changes induced by environment
generateKlemms	Generate Klemm adjacency matrices
generateSets	Generate multiple datasets
plotHubs	Generate SuperExactTest-compatible dataset
plotPrecisionvsRecall	Plot precision vs recall
plotSeries	Plot statistics
plotStats	Generate SuperExactTest p-value vector corrected for sampling design
plotSuperSet	Generate ggplots using some SuperExactTest code
plotUpset	Generate UpSetplot-compatible dataset
readCoNet	Read CoNet outputs
readSpar	Read SparCC outputs
testgCoda	Calls gCoda function
testSpear	Calls Spearman correlation
testSpiec	Calls SpiecEasi
writeFeatures	Write features
writeSets	Write datasets